Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902495.1_cds_XP_016452528.1_46757
CDS Infomation

[gene=LOC107777070] [db_xref=GeneID:107777070] [protein=probable serine protease EDA2 isoform X3] [protein_id=XP_016452528.1] [location=complement(join(20123..20238,21776..21859,22350..22424,23227..23321,23442..23647,24260..24331,24956..25072,25702..25884,26310..26465,27295..27420,28288..28461))] [gbkey=CDS]
Sequence

ATGAAGAAGTTAACTGGCTTAGCTCTACTTCTGGCTTTCTTCTTACAGTTGCTTAGAATC
TCAAAGGGAATCTCAAATTCTCAGCTTCTTCAGCAAATCAGTTCACAGAATAACAAATAC
TTGACCAAAGAAGAACACTGGTTCAATCAGACTCTTGATCACTTTTCTCCTTACGATCAT
CGTACATTTGGACAGAGGTACTATGAGTTTCTTGACTATTTCCGAAGTCCTGATGGACCC
ATATTTTTGAAAATTTGTGGAGAATCTGCTTGCAACGGGATACCGAATGATTACCTCAGT
GTTTTGGCGAAGAAGTTTGGAGCTGCTGTCGTTACTCTTGAGCATCGCTATTACGGGAAG
AGTTCACCCTTCAAATCCTTGACAACTGGGAATCTGAAATATTTGTCATCAAAACAGGCA
CTTTTTGACTTGGCAGCTTTCAGGAATTTCTATCAGGAGTCCCTGAACGTGAAGCTCAAC
AGATCCAATGTTGAAAACCCGTGGTTTTTCTTTGGTATTTCATACTCAGGAGCCCTTAGT
GCATGGTTTCGCCTGAAGTTTCCTCACCTGACTTGTGGAAGCCTTGCAAGCTCTGCTGTA
GTTCAAGCAGTTTACAGCTTCTCAGATTTTGACAAGCAGGTTGGCGAATCTGCTGGTCCA
GAATGTAAAGCAGTATTGCAAGAAATTACTCAACTAGTAGAAACAAGGCTTGCGTCAAAT
CGCAAGGACCTTAAAGCGTTGTTTGGTGCTGATGAGTTTCAATATGGAAGTCCAGACAAA
CTATGCATCCCACTACTTGAAGCAAAGAAGTCTGGGGAAGATTTAGTGAATGCATATGCC
ACTTATGTAAAGGAGTATTACATTAAGACTTTGGGGGTCAGCGTCAAAACATACAATCAG
GAAAATCTGAAGAACACTGCTGTAAATGGTGATACTTCTGATCACTTGTGGTGGTTCCAG
GTCTGCACAGAAGTTGCATATTTTCAGGTTGCACCCTCGAATGATAGTATTCGCTCTACT
AAAGTTGATACCAGATACCATTTGGACCTTTGCAGGAATGTCTTTGGCACCGGTATATAT
CCTGAAGTTGATGCAACTAACTTGTACTATGGAGGAACAAAAATTGCTGGGTCAAAGATT
ATCTTCACCAATGGATCACAGGATCCCTGGCGACATGCGTCAAAACAGACTTCTTCCCCA
GAGATGCCTTCTTACATAGTCTCTTGCCATAACTGTGGCCATGGAACTGACTTGCGGGGC
TGCCCCCAGTCTCCTTTAGTCCCTGAAGGTGACGCCAAAAACTGCAGTTCCCCTGATGCA
GTTCGGAAAGTAAGGGAAAAGATTGTTAAACATATAGATTTATGGCTGTCCCAGTGCCAG
GTTTCAGGTAGGAGTTGGATGTGA

Peptide Sequence

PEP ID

XP_016452528.1
PEP Infomation

PREDICTED: probable serine protease EDA2 isoform X3 [Nicotiana tabacum]
Sequence

MKKLTGLALLLAFFLQLLRISKGISNSQLLQQISSQNNKYLTKEEHWFNQTLDHFSPYDH
RTFGQRYYEFLDYFRSPDGPIFLKICGESACNGIPNDYLSVLAKKFGAAVVTLEHRYYGK
SSPFKSLTTGNLKYLSSKQALFDLAAFRNFYQESLNVKLNRSNVENPWFFFGISYSGALS
AWFRLKFPHLTCGSLASSAVVQAVYSFSDFDKQVGESAGPECKAVLQEITQLVETRLASN
RKDLKALFGADEFQYGSPDKLCIPLLEAKKSGEDLVNAYATYVKEYYIKTLGVSVKTYNQ
ENLKNTAVNGDTSDHLWWFQVCTEVAYFQVAPSNDSIRSTKVDTRYHLDLCRNVFGTGIY
PEVDATNLYYGGTKIAGSKIIFTNGSQDPWRHASKQTSSPEMPSYIVSCHNCGHGTDLRG
CPQSPLVPEGDAKNCSSPDAVRKVREKIVKHIDLWLSQCQVSGRSWM

Transcript Sequence

Gene sequence data has not been registered.